Lynx GEDI
 
Sample Genes
Sample list
Sample list
 
Gene Annotations
Various classes of gene annotations (e.g. functions, pathways, diseases association, tissue expression, etc) from Lynx Knowledge base integrating information from over 40 public databases
Go To Annotations »
Enrichment Analysis
Identification of gene categories over-represented in the user-submitted gene list based on Pathways, Gene Ontology, Diseases, Tissue expression and other features associations.
Go To Enrichment »
Genes Prioritization - Cheetoh
Networks and features based Gene Prioritization using Cheetoh algorithm. Using STRING-10.5 underlying network and feature categories in our enrichment page.
Go To Cheetoh »

Genes Prioritization - Pinta
Networks based Gene Prioritization using PINTA algorithms : Heat Kernal Ranking, Simple Random Walk, PageRank with Priors, HITS with Priors and K-Step Markov. Using STRING-10.5 underlying network.
Go To PINTA »
WGCNA Analysis (tutorial)
Weighted correlation network analysis (WGCNA) for finding modules of highly correlated genes based on a soft-thresholding co-expression network, provided as a stand-alone Web service for our Lynx users.
Go To WGCNA »
Coexpression Network Analysis
CoExpNet tool uses a multivariate Gaussian model to infer the gene interaction networks based on large-scale gene expression profile.

Go To CoExpNet »
 

News and Release Info

  • Lynx KB: Release v2018.1: September, 2018
  • Lynx Platform: Release v3.0: September, 2018
more..

About Us

Lynx platform is being developed by the Bioinformatics group at Prof. Gilliam's Lab at the Human Genetics Department, University of Chicago


Support & Feedback

Please contact us at:
lynx-dev@lists.uchicago.edu